Error message

  • Deprecated function: Using ${var} in strings is deprecated, use {$var} instead in include_once() (line 1442 of includes/bootstrap.inc).
  • Deprecated function: Using ${var} in strings is deprecated, use {$var} instead in include_once() (line 1442 of includes/bootstrap.inc).
  • Deprecated function: Using ${var} in strings is deprecated, use {$var} instead in include_once() (line 1442 of includes/bootstrap.inc).
  • Deprecated function: Using ${var} in strings is deprecated, use {$var} instead in include_once() (line 1442 of includes/bootstrap.inc).
  • Deprecated function: Using ${var} in strings is deprecated, use {$var} instead in include_once() (line 1442 of includes/bootstrap.inc).
  • Deprecated function: Using ${var} in strings is deprecated, use {$var} instead in include_once() (line 1442 of includes/bootstrap.inc).
  • Deprecated function: Automatic conversion of false to array is deprecated in qtip_clean_settings() (line 787 of sites/all/modules/qtip/qtip.module).

Visualizing MD Results: Stretching dsDNA Mini Tutorial
Tutorial PDF: 
PDF icon Stretching_dsDNA.pdf
Tutorial Files (link): 
Required tutorial files

This tutorial introduces VMD to a general scientific audience through an exploration of results from the study "Strain Softening in Stretched DNA" [B. Luan and A. Aksimentiev. Phys. Rev. Lett., 101:118101, 2008.]. Requires VMD. Tutorial works on Windows, Mac, and Unix/Linux platforms.