Error message

  • Deprecated function: Using ${var} in strings is deprecated, use {$var} instead in include_once() (line 1442 of includes/bootstrap.inc).
  • Deprecated function: Using ${var} in strings is deprecated, use {$var} instead in include_once() (line 1442 of includes/bootstrap.inc).
  • Deprecated function: Using ${var} in strings is deprecated, use {$var} instead in include_once() (line 1442 of includes/bootstrap.inc).
  • Deprecated function: Using ${var} in strings is deprecated, use {$var} instead in include_once() (line 1442 of includes/bootstrap.inc).
  • Deprecated function: Using ${var} in strings is deprecated, use {$var} instead in include_once() (line 1442 of includes/bootstrap.inc).
  • Deprecated function: Using ${var} in strings is deprecated, use {$var} instead in include_once() (line 1442 of includes/bootstrap.inc).
  • Deprecated function: Automatic conversion of false to array is deprecated in qtip_clean_settings() (line 787 of sites/all/modules/qtip/qtip.module).

Electrostatic Maps and Ion Conduction
Tutorial PDF: 
PDF icon ion-tutorial.pdf
Tutorial Files (link): 
Required tutorial files

This tutorial guides through all necessary steps to compute the ionic current and electrostatic potential map of a membrane channel or a synthetic nanopore. Requires VMD, NAMD, and Solvate. Tutorial works on Unix/Linux platform.